Data and models described in Reliable learning with PDE-based CNNs and DenseNets fordetecting Covid-19, Pneumonia and Tuberculosis from chestX-Rays images - article in review 1.PDE inspired CNNs parabolic and hyperbolic networks implemented in Meganet/examples/2018-jvmm pde/data: i) Exp1 - normal vs pneumonia It includes all the X-Rays for normal and pneumonia, 0.8 for training Ctrain_normal.mat, Cval_normal.mat - labels Ytrain_normal.mat, Yval_normal.mat - RGB images, 192x192 ii) Exp2 and Exp3 - covid, normal, pneumonia, tuberculosis It includes all Covid-19 AP or PA from Cohen dataset, gathered from Radiopaedia or SIRM. Version from december 2020 of the Cohen dataset + 350 randomly selected normal + 350 randomly selected pneumonia Ctrain_down.mat, Cval_down.mat - labels Ytrain_down.mat, Yval_down.mat - RGB images, 192x192 The entire dataset (0.8 training) - higly imbalanced Ctrain.mat, Cval.mat - labels Ytrain.mat, Yval.mat - RGB images, 192x192 pde/models Logs and models for Exp1, Exp2 and Exp3 2. DenseNet 2-Phase Chexpert_2Phase It includes i) 2 models for phase 1 - training from CheXpert ii) 3 models for phase 2 - training for multioutput covid, normal, pneumonia, tuberculosis 3. Progression-regression.pdf includes the results of models CheXpert14 and CheXpert-Covid19 on a case publicly available from Radiopaedie: https://radiopaedia.org/cases/covid-19-pneumonia-progression-and-regression This case includes several X-Rays of the same patient during a month. Observation: None of the X-Ray included in this test are seen on training the models.
Anca Nicoleta
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